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Pre-Cancer Atlas (PCA)

A tumor (yellow) is shown in the background. Components within the microenvironment are overlaid on the tumor, including a dendritic cell (pink), a T-cell (blue), a fibroblast (purple and pink), a natural killer cell (dark blue), a regulatory t cell (aqua), blood vessels (red), a macrophage cell (red with a yellow center), and a myeloid cell (green).

The Pre-cancer Atlas (PCA) Research Centers are part of the Human Tumor Atlas Network (HTAN). HTAN, an NCI-collaborative program, is constructing multi-dimensional atlases of the cellular, morphological, molecular, and spatial features of human cancers and their surrounding microenvironments over time.

The atlases being created by HTAN describe important changes during cancer progression, such as the transition of precancers to malignant tumors, the evolution of metastatic cancer, and the development of treatment resistance.

HTAN is supported by the NCI Division of Cancer Prevention (DCP), NCI Division of Biology (DCB), the NCI Division of Cancer Treatment and Diagnosis (DCTD), and the NCI Center for Strategic Science Initiatives (CSSI).

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About Pre-Cancer Atlas

The Pre-cancer Atlas (PCA) Research Centers, along with the Human Tumor Atlas (HTA) Research Centers and a Data Coordinating Center (DCC), make up HTAN. Each PCA Research Center will create a 2D/3D precancer atlas of a pre-cancerous lesion, focusing on how it changes into cancer.

PCA Research Centers have three major tasks:

  • Collecting, processing, and labeling biospecimens.
  • Studying the molecular, cellular, and spatial details of the lesions.
  • Analyzing and modeling the data.

PCA Research Centers will collaborate with other components of HTAN to make the data and analytical tools available to the research community.

Grantee Details

PI Name Sort descending PI Organization Title Grant Number Program Official
Zarrinpar, Amir

University Of California, San Diego
United States

Engineering Native E. coli to Detect, Report, and Treat Colorectal Cancer 5U01CA265719-05 Guillermo Marquez, Ph.D.
Zeng, Melody Yue

Weill Medical Coll Of Cornell Univ
United States

Dissecting the interplay between immunoglobulin G and the gut microbiome in cancer progression and metastasis 5R21CA270998-02 Young Kim, Ph.D.
Zhang, Zhen

Johns Hopkins University
United States

A multidisciplinary BCC for ovarian cancer early detection: translating discoveries to clinical use with a by-design approach 5U2CCA271891-04 Christos Patriotis, Ph.D., M.Sc.
Zhao, Yingqi

Fred Hutchinson Cancer Center
United States

Developing methods for advancing the early detection of pancreatic ductal adenocarcinoma leveraging electronic medical records data 1R01CA289668-01A1 Matthew Young, Ph.D.
Zhao, Hua

University Of Virginia
United States

Homologous recombination repair capacity in peripheral blood lymphocytes as a breast cancer risk factor 4U01CA260731-04 Claire Zhu, Ph.D.
Zheng, Qin

Johns Hopkins University
United States

Determining the function of medium to large diameter sensory neurons in paclitaxel-induced pain via large-scale in vivo DRG imaging 1R01CA291906-01A1 Rachel Altshuler, Ph.D.
Zheng, Yingye

Fred Hutchinson Cancer Center
United States

Precompetitive Collaboration on Liquid Biopsy for Early Cancer Assessment: Data Management and Coordinating Unit 5U24CA288185-03 Guillermo Marquez, Ph.D.
Zheng, Qin

Johns Hopkins University
United States

Determining the function of medium to large diameter sensory neurons in paclitaxel-induced pain via large-scale in vivo DRG imaging 1R01CA291906-01A1 Rachel Altshuler, Ph.D.
Zheng, Qin

Johns Hopkins University
United States

Determining the function of medium to large diameter sensory neurons in paclitaxel-induced pain via large-scale in vivo DRG imaging 1R01CA291906-01A1 Rachel Altshuler, Ph.D.
Zheng, Yingye

Fred Hutchinson Cancer Center
United States

The Early Detection Research Network: Data Management and Coordinating Center 5U24CA086368-25 Guillermo Marquez, Ph.D.
Zheng, Yingye

Fred Hutchinson Cancer Center
United States

The Early Detection Research Network: Data Management and Coordinating Center 5U24CA086368-25 Guillermo Marquez, Ph.D.
Zhou, Xianghong Jasmine

University Of California Los Angeles
United States

The UCLA Center in Early Detection of Liver Cancer 5U01CA230705-08 Sidney Fu, M.D.
Zhou, Xianghong Jasmine

University Of California Los Angeles
United States

Multi-cancer early detection using cell-free DNA methylome analysis 5U01CA285010-03 Nicholas Hodges, Ph.D.
Zhou, Xianghong Jasmine

University Of California Los Angeles
United States

Detecting and locating cancer for patients with CT-detected lung nodules 4R01CA264864-04 Guillermo Marquez, Ph.D.
Zhu, Yazhen

University Of California Los Angeles
United States

Click Chemistry-Mediated Surface Protein Assay for Quantifying Subpopulations of Hepatocellular Carcinoma-associated Extracellular Vesicles 5R01CA277530-03 Matthew Young, Ph.D.